CDS

Accession Number TCMCG005C25539
gbkey CDS
Protein Id XP_020274139.1
Location complement(join(121195210..121195259,121195345..121195417,121195504..121195566,121195944..121196044,121196125..121196248,121197583..121197645,121197758..121198798,121198962..121199028,121199116..121199231,121199353..121199439,121204167..121204256,121205205..121205273,121205512..121205580,121205689..121205746,121205953..121206010,121206141..121206208,121206378..121206457,121207287..121207347,121208205..121208276,121208411..121208470,121209763..121209817,121209913..121209946,121210321..121210407,121210774..121210851,121210957..121211145,121211239..121211369,121211466..121211565))
Gene LOC109848847
GeneID 109848847
Organism Asparagus officinalis

Protein

Length 1047aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA376608;
db_source XM_020418550.1
Definition pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1

EGGNOG-MAPPER Annotation

COG_category A
Description pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12813        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGATGAGAGGTACTTAAAGACTTGGGTCTCGGATAAGCTCATGTCACTCATGGGCTATTCTCAGAGTGTAGTTGTTCAGTATGTGATTCGTTTGTCAAAAGAAGCATCTTCGCCTTCTGATCTCGTGGCCAAGCTCGTCGACTATGGATTCTCGTCGTCAGCGGACACTCGGTCGTTTGCGCACGAAATATTCGCTAAAGTTCCTCATAGACAATCTGCCCCAAGTAGTTATCAGAAGCAAGAGAGAGAAGCAGCGCAGTTTGCAAAGAAACAGAGTAGCTACAAGCTTCTGGATGCTGATGATGAAGATGATGTGGATAATAACCTGACAGTGAGTACGCAGCAGGAGAGAGGCAGTGCTAAGAAGAGATTTCGGAAGAAGGGCGAAGCCAACGAGAGTGAGGATGATGATGAGCCGACTGTAGTTAAAGGCAGTGAAAGGAATGTTCGGAAGCGGACTTCAAAGGTGGATGAAAGTGAAGATGATATTGAGTCTGAGGAGGCTATACTACGTGATCAAGAGGAAAGAGCACAACTAGAGAGAAACATGAAAGAAAGAGATGCTGCAAAGACACGACAGTTGATGGAGCCAAAGTTATCAAAAAAGGAGGAAGAGGAGATACTTCGGAGATCAAAAGCTTTTGAGGAAAATAGTACTGTTGATCTAAGAAAAGTTTCAAGAGAAGTATACCTTAAGAAAAGGAGGGACCAGAAGCTTTTGGAGATTAGGGATGATATAATTGATCATGAGTACATCTTTGAAGGTGTTAAGCTGACAGATGCAGAAGAAAGAGAACTAAGGTACAAGAAGAAGATTTATGAGCTTGCAAAGGAGCACCTGGAGGATGTAGACGACACTGAGTATAAGATGCCTGAGGCATATGATCAAGATGGAGTTGTAAATCAAGAGAAAAGATTTGCTGCAGCTATGCAGCGGTACAGAGACCCTGGTGCTGAAGATAAGATGAATCCATTTGCTGAACAGGAAGCCTGGGAAGAGCATCAAATTGGAAAGGCAACCTTAAAGTTTGGCTCAAAAAATAAGAAACAAGCAAATGATGATTATCAGTATGTTTTTGAAGATGGAATTGATTTCATCAAGGCATCTGTAATGGATGGTGTCCAGTATGAAGACGAGTTGCGAGCTGAAAGCCCTGACACGTCCAGAGCAAAATCTGAGTTACAAAAACTTCAGGATGACAGAAAAACTCTTCCCATCTATCCCTACCGCGAGGAGTTACTTCAAGCTGTCAATGATCATCAGGTTCTTGTTATTGTTGGAGAGACCGGTTCTGGTAAGACTACACAGATACCCCAGTATCTTATTGAAGCTGGATATACAAAACACGGAAAGGTTGGATGTACACAACCGCGTCGAGTTGCTGCAATGAGTGTTGCTGCTCGTGTTTCGCAGGAGATGGGTGTTAAACTTGGTCATGAGGTGGGTTATTCAATTAGGTTTGAAGACTGCACTTCTGAAAAAACAGTTCTGAAGTATATGACGGATGGGATGCTGCTGAGGGAATTCCTCGGTGAACCTGATTTAGCAAGCTACAGCGTCATCATGGTGGATGAGGCACATGAGAGAACACTTTCAACAGATATTTTGTTTGGTTTGGTTAAGGATATTTCTCGCTTCCGGAAAGATCTTAAGCTTCTTATTTCAAGTGCGACACTTGATGCTGAGAAGTTTAGCGATTACTTCGACTCTGCACCCATTTTTAAGATACCGGGGAGGCGATATCCTGTCGAGATAAATTTTACTACAGCTCCAGAAGCAGATTACATCGATGCTGCTATTGTCACCGTTCTTCAAATACATATAACCCAATCTCCTGGTGATATTCTTGTGTTCCTCACAGGTCAGGAGGAAATTGAGACCGTGGATGAAATATTGAAGCACAGAACAAGGGGTTTAGGAACCAAAATAGCAGAACTTATAATATGCCCTATTTATGCTAATCTTCCTACAGAGCTTCAGGCTAAGATTTTCGAACCTACTCCAGAGGGGGCTCGGAAGGTTGTCTTGGCTACAAACATAGCAGAAACATCATTGACTATAGATGGGATAAAATATGTTGTTGATCCTGGTTTCTGTAAGATAAAATCATATAATCCACGGACAGGTATGGAATCTTTGTTAATTAATCCGATTTCAAGAGCTTCTGCAATGCAAAGGGCTGGAAGATCAGGACGCACTGGACCTGGAAAATGCTTTCGGTTGTATACTGCATATAATTATCATCATGATTTGGAAGAGAATACTGTGCCTGAGATCCAGCGGACGAATCTAGCTAATGTTGTGCTTACTCTTAAGAGCTTGGGCATCCATGATTTAGTGAATTTTGATTTTATGGACCCACCACCATCAGAAGCATTGCTTAAGGCCCTTGAGCAACTTTTTGCTCTTAGTGCACTAAATAGCAGGGGAGAGTTAACTAAAGTTGGAAGACGAATGGCAGAATTTCCACTTGATCCAATGCTCTCCAAGATGATAGTTGCTTCAGACAAATACAAGTGTTCAGATGAGATCATATCAATTGCTTCCATGCTCTCTGTTGGAAATTCAATCTTTTACCGTCCAAAGGATAAACAAGTACATGCAGACAATGCTAGACTCAACTTCCACACTGGCAATGTTGGAGATCATATTGCTCTTCTCAATGTTTACAATTCCTGGAAGGAAACCAACTTCTCGACTCAATGGTGCTATGAAAACTATATCCAGGTGCGGAGTATGAAACGAGCAAGAGATATTAGAGATCAGTTAGAAGGGCTTTTGGAAAGAGTTGAAATTGAGCTTACCTCAAACCCTGGTGATTTGGATGCTATTAAAAAGGCCATCACATCAGGGTTTTTCCATCATTCAGCAAGGTTGCAGAAGACTGGTGCATACCGAACTGTTAAAAATCCTCAAACAGTATACATACATCCCAGTTCTGGTCTAGCACAGGTGCTTCCCAGGTGGGTTATCTATCATGAACTTGTCCTTACTACCAAAGAGTACATGCGACAGGTTATAGAATTGAAACCCGAGTGGCTAGTTGAGATTGCACCACACTACTACCAATTGAAGGATGTTGAAGAATCCGGAGCAAAGAAGATGCCTCGAGGTGAAGGTAGAAGTGCAGTAAGCTAG
Protein:  
MADERYLKTWVSDKLMSLMGYSQSVVVQYVIRLSKEASSPSDLVAKLVDYGFSSSADTRSFAHEIFAKVPHRQSAPSSYQKQEREAAQFAKKQSSYKLLDADDEDDVDNNLTVSTQQERGSAKKRFRKKGEANESEDDDEPTVVKGSERNVRKRTSKVDESEDDIESEEAILRDQEERAQLERNMKERDAAKTRQLMEPKLSKKEEEEILRRSKAFEENSTVDLRKVSREVYLKKRRDQKLLEIRDDIIDHEYIFEGVKLTDAEERELRYKKKIYELAKEHLEDVDDTEYKMPEAYDQDGVVNQEKRFAAAMQRYRDPGAEDKMNPFAEQEAWEEHQIGKATLKFGSKNKKQANDDYQYVFEDGIDFIKASVMDGVQYEDELRAESPDTSRAKSELQKLQDDRKTLPIYPYREELLQAVNDHQVLVIVGETGSGKTTQIPQYLIEAGYTKHGKVGCTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTVLKYMTDGMLLREFLGEPDLASYSVIMVDEAHERTLSTDILFGLVKDISRFRKDLKLLISSATLDAEKFSDYFDSAPIFKIPGRRYPVEINFTTAPEADYIDAAIVTVLQIHITQSPGDILVFLTGQEEIETVDEILKHRTRGLGTKIAELIICPIYANLPTELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFCKIKSYNPRTGMESLLINPISRASAMQRAGRSGRTGPGKCFRLYTAYNYHHDLEENTVPEIQRTNLANVVLTLKSLGIHDLVNFDFMDPPPSEALLKALEQLFALSALNSRGELTKVGRRMAEFPLDPMLSKMIVASDKYKCSDEIISIASMLSVGNSIFYRPKDKQVHADNARLNFHTGNVGDHIALLNVYNSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIELTSNPGDLDAIKKAITSGFFHHSARLQKTGAYRTVKNPQTVYIHPSSGLAQVLPRWVIYHELVLTTKEYMRQVIELKPEWLVEIAPHYYQLKDVEESGAKKMPRGEGRSAVS